- Y. Aboelkassem (2023) Computational and theoretical model of electro-osmotic flow pumping in a microchannel with squeezing walls, Physics of Fluids 35 (5)
- M. Abdelgalil, Y. Aboelkassem, H. Taha (2023) Sea urchin sperm exploit extremum seeking control to find the egg, Physical Review E 106 (6), L062401
- D. Tripathi, D. Bhandari, R. Kumar, Y. Aboelkassem (2023) Modeling virus transport and dynamics in viscous flow medium, J. of Biological Dynamics 17 (1), 2182373
- Q. Counseller, Y Aboelkassem (2023) Recent technologies in cardiac imaging, Frontiers in Medical Technology 4, 984492
- Y. Aboelkassem and H. E. Taha (2022) A Cooperative Epidemiological Model Infectious Disease Dynamics: A COVID-19 Case Study. Advances in Nonlinear Dynamics (Book Chapter), pp. 39-48, 2022
- MA. Bahloul , Y. Aboelkassem and T-M Laleg-Kirati (2022) Hypertension Blood Flow Model Using Fractional Calculus, Front. Physiol. Vol 13, pp. 838593,
- Y. Aboelkassem and D. Savic (2021) Particle swarm optimizer for arterial blood flow models, Comput Methods Programs Biomed. Vol. 201 pp. 105933.
- SA Niederer, Y. Aboelkassem, Cantwell, ..., RW dos Santos and L. Wang (2020) Creation and Application of Virtual Patient Cohorts of Heart Models, Phil Trans Roy Soc A. Vol. 378 pp. 20190558, 2020
- RH Clayton, Y. Aboelkassem, CD Cantwell, ... C Roney, and RW dos Santos (2020) An Audit of Uncertainty in Multi-Scale Cardiac Electrophysiology Models. Phil Trans Roy Soc A. Vol. 378 pp. 20190335
- D. Tripathi, VK Narla, Y. Aboelkassem (2020), Electrokinetic membrane pumping flow model in a microchannel. Phys. Fluids. Vol. 32 pp. 082004
- S. Cao, Y. Aboelkassem, A Wang, JS Saucerman, JH Omens, McCulloch AD (2020), Quantification and Data Uncertainty in a Network Model of Cardiac Myocyte Mechanosignaling. Phil Trans Roy Soc A. Vol. 378 pp.20190336
- CL Lei, S Ghosh, D Whittaker, Aboelkassem Y., ....,GR. Mirams and R Wilkinson, (2020), Considering Discrepancy when Calibrating a Mechanistic Electrophysiology Model. Phil. Trans. R. Soc. A 378: 20190349.
- A. Wang, S Cao, Y Aboelkassem, Valdez-Jasso D (2020), Uncertainty Quantification of A New Network Model of Pulmonary Arterial Adventitial Fibroblast Pro-Fibrotic Signalling. Phil Trans Roy Soc A. Vol. 378 pp. 20190338
- Y. Aboelkassem, J. Powers, K. McCabe, and AD. McCulloch (2019), Multiscale Models of Cardiac Muscle Biophysics and Tissue Remodeling in Hypertrophic Cardiomyopathies. Curr Op BME, Vol. 11, pp. 35-44.
- Y. Aboelkassem, K. McCabe, G. Huber, M. Regnier, JA. McCammon and AD. McCulloch (2019), A Stochastic Multiscale Model of Cardiac Thin Filament Activation using Brownian-Langevin Dynamics. Biophysical J., Vol. 117 (12), pp. 2255-2272
- Aboelkassem, Y. (2019), Pumping Flow Model in a Microchannel with Propagative Rhythmic Membrane Contraction. Phys. Fluids, Vol. 31 (5), pp. 051902
- Aboelkassem, Y. , and Z. Virag (2019), A Hybrid Windkessel-Womersley Model for Blood Flow in Arteries. J. of Theoretical Biology, Vol. 462 (7), pp. 499-513.
- Tan M. P., K. S. Buchholz, S. Cao, Y. Aboelkassem, J. H. Omens, A. D. McCulloch, J. J. Saucerman (2019), Systems Modeling of Cardiomyocyte Mechanobiology. Molecular & Cellular Biomechanics, Vol. 16, pp. 13-14.
- Aboelkassem, Y. and N. Trayanova
Tropomyosin Dynamics During Cardiac Thin Filament Activation as Governed by a
Multi-Well Energy Landscape. Prog Biophys Mol Biol, Vol. 144, pp. 102-115, 2019
- Aboelkassem, Y. (2017), Stokes Flow Patterns Induced by a Single Cardiac Cell. Compu Biol Med., Vol. 86, pp.35-74.
- Aboelkassem, Y., and S. G. Campbell
Acute Optogenetic Modulation of Cardiac Twitch Dynamics Explored Through
Modeling. J. of Biomechanical Engineering, Vol. 138 (11), 2016
- Aboelkassem, Y., J. A. Bonilla, K. McCabe, and S. G. Campbell (2016), Contributions of Ca++ Independent Thin Filament Activation to Cardiac Muscle Function. Biophysical J., Vol. 109 (10), pp. 2101-2112.
- Aboelkassem, Y. (2016), Chaotic mixing by oscillating a Stokeslet in a circular Hele-Shaw microfluidic device. Nanoscale Syst.: Math. Model. Theory Appl, Vol. 5, pp. 1-8.
- Aboelkassem, Y., D. Savic and S. G. Campbell (2015), Mathematical Modeling of the Aortic Valve Dynamics during Systole. J. of Theoretical Biology, Vol. 365, pp. 280-288.
- Aboelkassem, Y., D. Savic, and S. G. Campbell (2015), Modeling Predicts A Connection Between Sinus Vortex Eeffects and Aortic Compliance. J. of Theoretical Biology, Vol.389, pp. 306-309.
- Aboelkassem, Y. (2015) (Invited Article), Insect-Inspired Micropump: Flow in a Tube with Local Contractions. Micromachines, Vol. 8, pp. 1143-1156.
- Aboelkassem, Y. (2015), A Ghost-Valve Micropumping Paradigm for Biomedical Applications. Biomed. Eng. Lett., Vol. 5, pp. 45-50.
- Aboelkassem, Y., and A. E. Staples (2014), A three-dimensional model for flow pumping in a microchannel inspired by insect respiration. Acta Mechanica, Vol. 225 (2), pp. 493-507.
- Aboelkassem, Y., and A. E. Staples (2013), Selective Pumping in a Network: Insect-Style Microscale Flow Transport. Bioinspiration \& Biomimetics, Vol. 8, pp. 026004.
- Aboelkassem,Y., A. E. Staples (2013), A Bioinspired Pumping Model for Flow in a Microtube with Rhythmic Wall Contractions'', J. of Fluids and Structures, Vol. 42, pp. 187-204.
- Aboelkassem, Y., and A. E. Staples (2013), Stokeslets-Meshfree Computations and Theory for Flow in a Collapsible Microchannel. Theoretical \& Computational Fluid Dynamics, Vol. 27, pp. 681-700.
- Aboelkassem, Y., and A. E. Staples (2012), Flow Transport in a Microchannel Induced by Moving Wall Contractions: A Novel Micropump Mechanism. Acta Mechanica, Vol. 223 (3), pp. 463-480.
- Aboelkassem, Y., AH Nayfeh and M. Ghommem, (2010), Bio-Mass Sensor using an Electrostatically Actuated Microcantilever in a Vacuum Microchannel. J. of Microsystems Technologies, Vol. 39 (2), pp. 183-192.
- Aboelkassem, Y. (2011), Numerical Simulations of Electroosmotic Complex Flow Patterns in a Microchannel. Computers and Fluids, Vol. 52, pp. 104-115.
- Aboelkassem, Y. (2010), Electroosmotic flow in a microchannel for microfluidic applications. European J. of Scientific Research, Vol. 39(2), pp. 183-192.
- Aboelkassem, Y. (2009), Dissipations of Intense Vortices. Canadian Journal of Physics, Vol. 87 (6), pp. 685-689.
- Aboelkassem, Y. (2009), Blade Vortex Interactions: Experimental Measurements of the Near- Flow Field. J. of Fluid Science and Technology, Vol. 4(1), pp. 138-155.
- Aboelkassem, Y. (2007) , Trailing Vortex Filament: A Novel Similarity Analysis. J. of Aircraft, Vol. 44(2), pp. 683-687.
- Aboelkassem, Y., and G. H. Vatistas (2007), New Model for Compressible Vortices. J. of Fluids Engineering, Vol. 129, pp. 1073-1079.
- Aboelkassem, Y., and G. H. Vatistas (2007), On the Refracted Patterns Produced by Liquid Vortices. Acta Mechanica Sinica, Vol. 23, pp. 11-15.
- Lee, T., and Aboelkassem, Y. (2006), Interaction of a Streamwise Vortex with a Blade Tip Vortex. J. of Aircraft, Vol.43(6), pp. 1956-1958.
- Vatistas, H. G., and Aboelkassem, Y. (2006), Space-Time Analogy of Self-Similar Intense Vortices. AIAA , Vol. 44(4), pp. 912-917.
- Vatistas, G.H., and Aboelkassem, Y.(2006), Extension of the Incompressible n=2 Vortex into Compressible. AIAA, Vol. 48(8), pp. 1912-1915.
- Jawarneh, A., Vatistas, G.H., and Aboelkassem, Y. (2005), Experimental Investigations of the Pressure drop in a Sink-Swirl Flow within Two Disks. J. of Propulsion and Power, Vol. 21(4), pp. 759-760.
- Aboelkassem, Y., G. H. Vatistas , and N. Esmail (2005), Viscous Dissipation of Rankine Vortex Profile in Zero Meridional Flow. Acta Mechanica Sinica, Vol. 21(6), pp. 550-560.
- Vatistas, H. G., Aboelkassem, Y. and Siddiqui, K. (2005), Time Decay of n- Family of Vortices. AIAA, Vol. 43(6), pp. 1389-1391.